| Type of Stress | miRNA biomarkers | Up regulated | Down regulated | References |
| Virus | miR171 | Kasschau et al. 2003, Zhou and Luo 2013 | ||
| miR156, miR164 | Kasschau et al. 2003 | |||
| miR159 | Naqvi et al. 2008 | |||
| miR164, miR171 | ||||
| miR1885 | He et al. 2008 | |||
| Bacteria | miR393 | Navarro et al. 2006 | ||
| miR398 | Jagadeeswaran et al. 2009 | |||
| miR160, miR167 | Fahlgren et al. 2007 | |||
| miR825 | ||||
| Fungi | miR156, miR159, miR164, miR171, miR396 | Xin et al.2010 | ||
| miR393, miR444, miR827 | ||||
| miR7696 | Campo et al. 2013 | |||
| Nematode | miR161, miR164, miR167a, miR172c, miR396a,b, miR398a | Hewezi et al. 2008 |